ONCO.IO

ONCO.IO is an integrative resource for microrna and transcription factors analysis in cancer.

Network analysis tools Build network by filter

* we are migrate to a new server (again..)


Database is updated every day (?)
last update: MIR98=>MAP4K3, 2020-06-01 00:24:06 by rhizoman1

ONCO.IO statistics

Total number of interactions:
16873

binding of miRNA:
6503

transcription regulation:
4655

drug interactions:
454

chemo/drugresistance:
211

metabolic reactions:
8244

TF => ncRNA reactions:
745

drug => gene/miR reactions:
454
Path. processes associations:
15568

Diseases associations:
9649

Pubmeds:
18707

Express.levels associations:
4103

Prognosis associations:
1954

Diagnosis associations:
52

Biomarker localization:
5300

Cell lines associations:
18297

Tumor stage associations:
55

Methods associations:
51284

Cell Localization:
413
number of new added interactions:
for last week:
186
(
+29
)
for last 2 weeks:
343

for last month:
369 (
+369
)

for last two month:
369

graph view
top annotators of last month:
rhizoman1:
369
(
+369
)

Last added links:
SPOPL= ubiquitination =>EPS15
KLHL20= ubiquitination =>CORO7
KLHL12= ubiquitination =>SEC31A
KLHDC5= ubiquitination =>KATNA1
KLHL9= ubiquitination =>AURKB
KLHL13= ubiquitination =>AURKB
KLHL21= ubiquitination =>AURKB
CUL3= binding =>KLHL18
KLHL18= ubiquitination =>AURKA
KCTD21= ubiquitination =>HDAC1


Long non-coding RNA interactions page

ONCO.IO is an integrated knowledge database and network analysis tool for exploring complex gene regulatory networks involved in cancer.

ONCO.IO database content is based on the manually curated annotation of experimentally verified molecular interactions described in the literature and includes microRNAs, lncRNAs, mRNAs, signaling proteins and transcription factors interactions.

Key features:


Search term and build network:


Processes

Pathogenic process (PP) - molecular, cellular or tissue malfunction determining initiation, development and outcome of disease. Full list of PP is here
Interactions (or edges) are associated with pathogenic process and can influence as positively and negatively on the process.

Processes:

Diseases

Diseases:

Genes and ncRNAs

Symbol:

Or use more complex filters.

News:

Moscow Cancer Center Employees Threaten to Quit as Doctor Resignation Wave Hits Capital 03 October 2019 16:50:10 by Sasha Fokin
Doctors from the Research Institute of Pediatric Oncology and Hematology of the Blokhin National Medical Research Center for Oncology demanded a change of leadership. In a statement on the Doctors Alliance’s YouTube channel, they said they would quit otherwise.

Doctors complained of poor conditions for patients: lack of ventilation and mold in crowded rooms. Management, they said, instead of economic issues is engaged in "hardware struggle."

Another reason for writing applications was the dismissal of Georgy Mentkevich, the creator of the country's first bone marrow transplant department. Other specialists were forced to quit along with him.

At least 26 childrens oncologists at the Blokhin Cancer Center have threatened to quit if its recently appointed leader isnt fired, pay transparency isnt introduced and overcrowded and mold-covered wards arent replaced.

Thanks to our visitors! 26 July 2019 16:25:13 by Sasha Fokin
We thank the anonymous guest for pointing out the vulnerabilities. They are was patched, but there is still much to be done, and we are gradually completing it. While the project is running in the background.
miRs in prostate cancer: comlex regulatory connections with cancer hallmarks 18 January 2019 23:53:17 by Rhizoman1
Next week we will annotate regulatory interactions in prostate cancer. Prostate cancer (PCa) is considered the most prevalent malignancy and the second major cause of cancer-related death in males from Western countries. Androgen deprivation therapy (ADT) is the primary treatment option for male patients with advanced symptomatic PCa. Castration-resistant prostate cancer (CRPC) refers to the continuous progression of PCa following ADT. We will focus on the role of non-coding RNAs and transcription factors in prostate cancer development and progression.
Paywall: The Business of Scholarship 26 December 2018 16:17:32 by Sasha Fokin
Paywall: The Business of Scholarship is a documentary which focuses on the need for open access to research and science, questions the rationale behind the $25.2 billion a year that flows into for-profit academic publishers, examines the 35-40% profit margin associated with the top academic publisher Elsevier and looks at how that profit margin is often greater than some of the most profitable tech companies like Apple, Facebook and Google.

Paywall: The Business of Scholarship (Full Movie) CC BY 4.0 from Paywall The Movie on Vimeo.

The program of reduce the critical dependence of Russian science on foreign genetic and biological databases. 26 December 2018 16:10:04 by Sasha Fokin
"The Ministry of Education and Science proposes to allocate 220.5 billion rubles. on the development of genetic technologies in the framework of the federal scientific and technical program for the years 2019-2027. This is stated in the draft government decree on the approval of the program, published on Friday on the federal portal of draft regulations. The implementation of the program is designed to "reduce the critical dependence of Russian science on foreign genetic and biological data bases, foreign specialized software and devices, the programs passport says. In Russia, bioinformatics and genetic databases, basic reagents and software products and equipment prototypes should be created." The leading scientific organization will be the Kurchatov Institute. The ONCO.IO is made entirely by our forces and means without the help of any other structures and organizations. This is a completely independent product. For all inhabitants of the planet Earth, we provide equal access to ONCO.IO and his services.
Immune response interactome! 06 October 2018 01:24:29 by Rhizoman1
T-cell-DC, signaling and regulatory pathways that develop immune response. Co-regulatory and repressor molecules. Receptors, signaling molecules, transcription factors as are drivers of anti-cancer immunity. Next week we will annotate immunoregulatory interactome! This is dedicated to the Nobel prize in Physiology or Medicine 2018!
Hooray! Today our database reached the milestone of 15,000 manualy curated validated links 27 September 2018 15:33:44 by Sasha Fokin

Blog

Last saved networks:

UPR_(unfolded_protein_response)_signaling [29 May 2020 02:14:33 by guest ]
UPR_(unfolded_protein_response)_signaling [28 May 2020 20:23:13 by guest ]
UPR_(unfolded_protein_response)_signaling [28 May 2020 17:12:48 by guest ]
ER_stress_response [27 May 2020 15:50:53 by guest ]
CEP Proteins interactions [26 May 2020 20:12:12 by guest ]
NOTCH_signaling_v1 [26 May 2020 17:55:58 by guest ]
EMT_signaling_v1 [26 May 2020 17:50:58 by guest ]
CEP Proteins interactions [25 May 2020 02:53:36 by guest ]
AKT signaling_v1 [21 May 2020 19:55:47 by guest ]
mTOR signaling_v1 [21 May 2020 19:53:49 by guest ]
Fanconi Anemia Signaling [21 May 2020 18:58:45 by guest ]
CCR4–NOT complex [21 May 2020 18:45:10 by guest ]
CCR4–NOT complex [21 May 2020 17:33:05 by guest ]
apoptosis_V1 [15 May 2020 13:01:52 by guest ]
EGF_signaling [14 May 2020 19:05:20 by guest ]
FGFR signaling_v1 [14 May 2020 18:58:46 by guest ]
YM [05 May 2020 14:33:18 by guest ]
YM [05 May 2020 13:58:57 by guest ]
mir186-3p [02 April 2020 15:10:04 by annalaura ]
mir185-3p [02 April 2020 14:51:10 by guest ]
miR210 [19 February 2020 12:01:45 by guest ]
HIF1A to PDL1 [18 January 2020 18:44:30 by guest ]
[29 December 2019 23:53:28 by guest ]
12 кириллица Test /2534% [23 December 2019 14:27:15 by guest ]
mir19a [09 December 2019 18:17:28 by guest ]
mir19a [09 December 2019 18:14:44 by guest ]
mir19a [09 December 2019 18:05:06 by guest ]
mir19a [09 December 2019 18:03:23 by guest ]
mir19a [09 December 2019 18:00:20 by guest ]
PDCD1, CD274, HIF1A [07 December 2019 06:33:13 by guest ]
23 as [05 December 2019 23:06:55 by Sasha Fokin ]
the network 1 [05 December 2019 23:00:49 by guest ]
12 кириллица Test /2534%#$ [05 December 2019 22:58:29 by Sasha Fokin ]
yet another test кириллица [05 December 2019 22:55:23 by Sasha Fokin ]
pin1 [30 November 2019 11:15:43 by guest ]
network_1573561931 [12 November 2019 16:32:11 by guest ]
test1_5 [08 November 2019 14:59:01 by guest ]
test1_43 [08 November 2019 14:57:02 by guest ]
test1_2 [08 November 2019 14:40:03 by guest ]
test1_123 [08 November 2019 14:37:05 by guest ]
All saved networks

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Metabolites

Pubmeds

Drugs

Interactions

Mutations

Educational game